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Cyanine 5 SE

Cyanine 5 SE (Ex-Max 643 nm/Em-Max 663 nm)

Cyanine 5 has an excitation peak at 649 nm and an emission peak at 667 nm. Spectrally its similar to Alexa Fluor™ 647.

Excitation & emission spectra

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Key facts

Excitation maximum
643 nm
Emission maximum
663 nm
Optimal laser line
628-640
Optimal filter
660/20
Relative brightness
3 of 5
Extinction coefficient
250000
Quantum yield
0.2

Cyanine 5 SE has an excitation maximum at 643 nm and an emission maximum at 663 nm, a Stokes shift of 20 nm. Its extinction coefficient is 250000 M⁻¹cm⁻¹. It is optimally excited by the 628-640 laser line.

Frequently asked questions

What is Cyanine 5 SE?
Cyanine 5 has an excitation peak at 649 nm and an emission peak at 667 nm. Spectrally its similar to Alexa Fluor™ 647.
What laser excites Cyanine 5 SE?
Cyanine 5 SE is optimally excited by the 628-640 laser line. Its excitation maximum is 643 nm.
What filter should I use to detect Cyanine 5 SE?
A 660/20 filter captures the peak of the Cyanine 5 SE emission near 663 nm with minimal spillover.
How bright is Cyanine 5 SE?
Cyanine 5 SE has a relative brightness of 3 out of 5 (quantum yield 0.2).