OMIP-073
Analysis of human thymocyte development with a 14-color flow cytometry panel
Cytometry PART A, Volume 99, Issue 9, 875-879 (2021)
Sarah-Jolan Bremer, Laura Glau, Christina Gehbauer, Annika Boxnick, Daniel Biermann, Jörg Siegmar Sachweh, Eva Tolosa, Anna Gieras
Description: This panel was designed for the identification and detailed characterization of the different developmental steps of human thymocytes. We optimized the panel for fresh tissue in order to provide an unbiased analysis of T cell development. Accurate selection of antibodies and precise gating allow us to phenotype 14 major stages of human thymocyte development and illustrate the trajectories of T cell development from early thymic progenitors (ETP) to mature T cells that are ready to populate the periphery. The panel identifies ETPs, T-lineage-committed cells (TC), CD34-positive immature single-positive CD4 cells (ISP4 CD34+), CD34-negative immature single-positive CD4 cells (ISP4 CD34-), CD45-low early double-positive cells (EDP CD45low), CD45-high early double-positive cells (EDP CD45high), late double-positive cells (LDP), single-positive CD4 cells (SP4), single-positive CD8 cells (SP8), ready-to-egress single-positive CD4 cells (rSP4), ready-to-egress single-positive CD8 cells (rSP8), T γδ cells (Tγδ), T regulatory cells (Treg), and ready-to-egress T regulatory cells (rTreg). To highlight important checkpoints during T cell development, we added antibodies relevant for specific developmental steps to the panel. These include CD1a to define TCs, CD28 as a marker for ß-selection and CD69 in combination with CD45RA to determine the maturation stage of thymocytes shortly before they become ready to egress the thymus and colonize the periphery. Moreover, Annexin V, as a marker for apoptosis, provides valuable extra information concerning the apoptotic death of thymocytes. Currently, we use this panel to identify aberrations in T cell development in health and disease.
Species: Human
Tissue: Thymus
Cell Subset: T cell, Ctl, T helper, Tcrgd, Treg, Recent thymic emigrants (rte)
Keyword: Apoptosis, Lymphopoiesis
Machine: BD LSR Fortessa
Panel details
Marker | Species | Clone | Fluorophore | Purpose | Co-expressions groups | Antigen Density |
---|---|---|---|---|---|---|
Dead Cell | All Species | Alexa Fluor 750 | viability | apoptosis | ||
CD45 | Human | HI30 | Brilliant Violet 510 | Leucocytes | ETP, Treg, ISP, DP, SP, TCRgd | High |
CD3 | Human | OKT3 | Brilliant Violet 650 | T cells | DP, Treg, TCRgd | Low |
CD45RA | Human | HI100 | Brilliant Violet 711 | Lineage marker during early and late developmental stages | ETP, Treg, SP | Low |
CD1a | Human | HI149 | FITC | T cell lineage commitment | Treg, SP, ISP, DP | Med |
CD69 | Human | FN50 | PerCP-Cy5.5 | Tissue retention marker | SP, Treg, TCRgd | Med |
CD34 | Human | 563 | PE | Hematopoietic stem and progenitor cells | ||
CD28 | Human | CD28.2 | PE-Cy7 | ß-selection | DP, Treg, TCRgd | Med |
Annexin V | All Species | Alexa Fluor 647 | Apoptosis | apoptosis | ||
CD7 | Human | M-T701 | Alexa Fluor 700 | T cell lineage | ETP, ISP | Low |
TCR gamma/delta | Human | 11F2 | Brilliant Violet 605 | γδ T cell | TCRgd | Low |
CD25 | Human | BC96 | Brilliant Violet 421 | T regulatory cells | Treg | Low |
CD8a | Human | RPA-T8 | Brilliant Violet 785 | CD8 T cells and double-positive cells | SP, DP | Low |
CD4 | Human | RPA-T4 | PE-Dazzle 594 | CD4 T cells, ISP4 and double-positive cells | TCRgd, DP, SP, ISP | Med |